Our Services
Decode. Assemble. Discover.
We architect computational pipelines that transform sequencing data into biological clarity, so you can focus on the science.
NGS Data Analysis
Oxford Nanopore and Illumina sequencing pipelines. Basecalling, quality control, alignment, variant calling, and downstream interpretation - delivered reproducibly.
Long-read sequence
Short-read sequence
Transcriptomics & Multi-omics
Bulk and single-cell RNA-seq. Differential expression, co-expression networks, ChIP-seq, methylation analysis, and pathway enrichment.
RNA-seq
Whole Genome Seq
Epigenomics
Genome Assembly & Annotation
De novo and reference-guided assembly for non-model organisms. Repeat masking, gene prediction, and functional annotation pipelines.
De novo & Reference based
Annotation
Model & Non-model
Custom Pipelines & Consulting
Reproducible Nextflow and Snakemake workflows. Primer design for non-model organisms. Population genomics. Genome-wide association studies. Bespoke solutions for your research question.
Nextflow & Docker
Custom pipelines
Consulting
Our Process
Connecting Sequences to Discovery
Precision bioinformatics for next-generation sequencing. Long-read analysis. Genome assembly. Multi-omics pipelines. Built for researchers who move fast.
Step 1
Discovery & Scoping
We discuss your research question, data type, and expected outputs. You get a clear scope document and timeline.
Analyzing current workflow..
System check
Process check
Speed check
Manual work
Repetative task
Step 2
Pipeline Engineering
We build or adapt reproducible analysis pipelines tailored to your organism, sequencing platform, and biological question.
Step 3
Analysis & QC
Your data is processed through rigorous quality checks. Every step is documented, version-controlled, and transparent.
Our solution
Your stack
Step 4
Delivery & Support
You receive publication-ready figures, annotated results, reproducible code on GitHub, and a written summary of findings.
Chatbot system
Efficiency will increase by 20%
Workflow system
Update available..
Sales system
Up to date
Benefits
Why Researchers Choose
Nexilome
Built by researchers for researchers. Every pipeline is designed with scientific rigour and real-world reproducibility.
Non-Model Organism Expertise
Specialist experience with organisms that lack reference genomes, annotation databases, or standardised workflows.
Long-Read Sequencing Focus
Deep Oxford Nanopore expertise from basecalling through to structural variant detection and isoform-level transcriptomics.
Reproducible by Design
Every analysis ships with version-controlled code, containerised environments, and documentation your reviewers will love.
Publication-Ready Outputs
Figures, statistical summaries, and methods text drafted to journal standards. Ready for your manuscript.
Multi-Omics Integration
Combine genomics, transcriptomics, epigenomics, and proteomics into coherent biological narratives.
Transparent Communication
Regular updates, clear documentation, and plain-language summaries so you always know what your data is saying.
Pricing
Project Pricing
Every project is scoped individually. These tiers give you a clear starting point. Your quote is based on sample count, organism, and complexity.
FAQs
We’ve Got the Answers You’re Looking For
Common questions about working with Nexilome
What sequencing platforms do you support?
How long does a typical project take?
Do you provide the code and pipelines?
What organisms do you work with?
What file formats do you accept?
Let's Decode Your Data
Book a free discovery call and get a clear scope for your project.